Software
GPCRmd
GPCRmd is an online platform with web-based visualization capabilities and a comprehensive analysis toolbox that allows scientists from any discipline to visualize, inspect, and analyse GPCR molecular dynamics.
GMoS
GMoS (GPCRs Motif Searcher) is a program to search for conserved sequence motifs in Class A GPCRs. The results are classified according to the percentage of occurrences within each subfamily.
GPCR-SAS
The G Protein-Coupled Receptors – Sequence Analysis and Statistics (GPCR-SAS) web application provides a set of tools to perform comparative analysis of sequence positions between receptors, based on a curated structural-informed multiple sequence alignment.
GPCR-Browser
In this web server, full sequence and binding site classifications are stored and a web interface enabling users to find the related information for a query receptor. Using as input the uniprot protein code or the fasta sequence of a GPCR, the web application displays detailed information about it and produces several tables and analysis graphs. The information is intended to be displayed on a highly user-friendly interface.
TMalphaDB
The Transmembrane Alpha Helix DataBase is a curated database of transmembrane protein structures containing alpha helices. The user can search for transmembrane stretches containing specific sequence motifs, and get relevant structural information (phi and psi dihedral angles, bend and twist unit angles) from the hits.
TMbetaDB
The Transmembrane Beta Sheet DataBase is a curated database of transmembrane protein structures containing ß-barrels. The user can search for transmembrane stretches containing specific sequence motifs, and get relevant structural information (phi and psi dihedral angles, bend and twist unit angles) from the hits.